New paper of interest on how premature infant gut microbiome shapes the microbiome of NICUs

There is a new paper of interest from Jill Banfield’s lab.  I found out about it via Twitter: Study on the NICU microbiome out now in @MicrobiomeJ – The developing premature infant gut microbiome is a major factor shaping the microbiome of neonatal intensive care unit rooms. https://t.co/GEtMkLxwUy @bmbrook @MattagenOlmics @mcgrath_bio @dahanome — The Banfield …

New paper of potential interest on economic development and the human microbiome

There is a new paper out of possible interest. Source: Stagaman K, Cepon-Robins TJ, Liebert MA, Gildner TE, Urlacher SS, Madimenos FC, Guillemin K, Snodgrass JJ, Sugiyama LS, Bohannan BJM. 2018. Market integration predicts human gut microbiome attributes across a gradient of economic development. mSystems 3:e00122-17. https://doi.org/10.1128/mSystems.00122-17.     Abstract: Economic development is marked by dramatic …

New Report: Environmental Chemicals, the Human Microbiome, and Health Risk: a Research Strategy

​This seems likely to be of interest to many​ – got this via email. New Report: Environmental Chemicals, the Human Microbiome, and Health Risk: a Research Strategy The human microbiome is composed of a great number of diverse microorganisms that inhabit the human body. Until recently, the role of the microbiome in maintaining human health …

Postdoctoral positions in engineering the microbiome – Cornell University

The Brito Lab at Cornell University in Ithaca, NY works in the area of systems biology of the human microbiome. We are looking for talented postdocs to fill two open positions for postdoctoral researchers interested in investigating mechanistic linkages between microbes and human health outcomes. Postdoctoral candidates can have an experimental or computational background, or both. One of …

Investigating the antibiotic resistome of rural and peri-urban Latin America

For many years, efforts to profile the antibiotic resistome of the human gut focused exclusively on two extremes of human society: Western, industrialized cities and remote hunter-gatherers. While these studies were undoubtedly important, they overlooked the majority of the world’s population, which exists somewhere between the two extremes. Indeed, three-quarters of the world’s population lives …

Don’t diss microbial eukaryotes in human gut by calling them all parasites 

There is an interesting paper from Julius LukeÅ¡ et al. in PLOS Pathogens that is worth looking at for anyone who works on microbial diversity: PLOS Pathogens: Are Human Intestinal Eukaryotes Beneficial or Commensals? They basically argue (reasonably I think) that the roles of microbial eukaryotes in the human gut have been excessively interpreted as parasitic and that …

MicrobiomeDigest – your daily fix of microbiome literature

Microbiomes are everywhere. Not only inside and around us, but also in the scientific literature. Not too many years ago, only a handful of microbiology laboratories were analyzing the composition of the invisible communities that surround us. Today, it feels as if every other scientist is doing something microbiome-related. New techniques such as high-throughput sequencing and …